Bakulin, Artemy

5 publications

ICLRW 2025 2DE: A Probabilistic Method for Differential Expression Across Niches in Spatial Transcriptomics Data Nathan Levy, Florian Ingelfinger, Artemy Bakulin, Giacomo Cinnirella, Pierre Boyeau, Can Ergen, Nir Yosef

ICLRW 2025 Ai Agent for Data-Driven Hypothesis Exploration in Single-Cell Transcriptomics Artemy Bakulin, Pierre Boyeau, Nir Yosef

ICLRW 2025 Nolan: Constructing Graph Representation of Tissue Structure with Self-Supervised Learning Artemy Bakulin, Nathan Levy, Can Ergen, Jonas Maaskola, Nir Yosef

ICLRW 2025 Nolan: Self-Supervised Framework for Mapping Continuous Tissue Organization Artemy Bakulin, Nathan Levy, Can Ergen, Jonas Maaskola, Nir Yosef

CLeaR 2025 The CausalBench Challenge: A Machine Learning Contest for Gene Network Inference from Single-Cell Perturbation Data Mathieu Chevalley, Jacob Sackett-Sanders, Yusuf H Roohani, Pascal Notin, Artemy Bakulin, Dariusz Brzezinski, Kaiwen Deng, Yuanfang Guan, Justin Hong, Michael Ibrahim, Wojciech Kotlowski, Marcin Kowiel, Panagiotis Misiakos, Achille Nazaret, Markus Püschel, Chris Wendler, Arash Mehrjou, Patrick Schwab