Costa, Allan Dos Santos

5 publications

ICLRW 2025 Efficient Molecular Conformer Generation with SO(3) Averaged Flow-Matching and Reflow Zhonglin Cao, Mario Geiger, Allan Dos Santos Costa, Danny Reidenbach, Karsten Kreis, Tomas Geffner, Franco Pellegrini, Guoqing Zhou, Emine Kucukbenli

ICML 2025 Efficient Molecular Conformer Generation with SO(3)-Averaged Flow Matching and Reflow Zhonglin Cao, Mario Geiger, Allan Dos Santos Costa, Danny Reidenbach, Karsten Kreis, Tomas Geffner, Franco Pellegrini, Guoqing Zhou, Emine Kucukbenli

ICLRW 2025 EquiJump: Protein Dynamics Simulation via SO(3)-Equivariant Stochastic Interpolants Allan Dos Santos Costa, Ilan Mitnikov, Franco Pellegrini, Ameya Daigavane, Mario Geiger, Zhonglin Cao, Karsten Kreis, Tess Smidt, Emine Kucukbenli, Joseph Jacobson

ICLRW 2025 RiboGen: RNA Sequence and Structure Co-Generation with Equivariant Multiflow Dana Rubin, Allan Dos Santos Costa, Manvitha Ponnapati, Joseph Jacobson

ICLRW 2024 Ophiuchus: Scalable Modeling of Protein Structures Through Hierarchical Coarse-Graining SO(3)-Equivariant Autoencoders Allan Dos Santos Costa, Ilan Mitnikov, Mario Geiger, Manvitha Ponnapati, Tess Smidt, Joseph Jacobson