Frey, Brendan

9 publications

ICLRW 2024 Contrastive RNA Representation Learning Through Maximizing Mutual Information Between Splice Isoforms Philip Fradkin, Ruian Shi, Keren Isaev, Caitlin Fiona Harrigan, Quaid Morris, Bo Wang, Brendan Frey, Leo J Lee

NeurIPSW 2024 DeepADAR: A Deep Learning Approach to Model Regulatory Elements of ADAR-Based RNA Editing and Its Application to gRNA Design Andrew J Jung, Alice J. Gao, Leo J Lee, Brendan Frey

NeurIPSW 2024 Orthrus: Towards Evolutionary and Functional RNA Foundation Models Philip Fradkin, Ruian Shi, Keren Isaev, Brendan Frey, Quaid Morris, Leo J Lee, Bo Wang

ICML 2014 Min-Max Problems on Factor Graphs Siamak Ravanbakhsh, Christopher Srinivasa, Brendan Frey, Russell Greiner

NeurIPS 2013 Adaptive Dropout for Training Deep Neural Networks Jimmy Ba, Brendan Frey

AISTATS 2010 Solving the Uncapacitated Facility Location Problem Using Message Passing Algorithms Nevena Lazic, Brendan Frey, Parham Aarabi

AISTATS 2009 Semi-Supervised Affinity Propagation with Instance-Level Constraints Inmar Givoni, Brendan Frey

AISTATS 2005 Generative Model for Layers of Appearance and Deformation Anitha Kannan, Nebojsa Jojic, Brendan Frey

NeurIPS 2002 Fast Transformation-Invariant Factor Analysis Anitha Kannan, Nebojsa Jojic, Brendan Frey