Kelly, Ryan Lewis

3 publications

TMLR 2024 Blind Biological Sequence Denoising with Self-Supervised Set Learning Nathan Hoyen Ng, Ji Won Park, Jae Hyeon Lee, Ryan Lewis Kelly, Stephen Ra, Kyunghyun Cho

ICLRW 2023 Learning Protein Family Manifolds with Smoothed Energy-Based Models Nathan C. Frey, Dan Berenberg, Joseph Kleinhenz, Isidro Hotzel, Julien Lafrance-Vanasse, Ryan Lewis Kelly, Yan Wu, Arvind Rajpal, Stephen Ra, Richard Bonneau, Kyunghyun Cho, Andreas Loukas, Vladimir Gligorijevic, Saeed Saremi

NeurIPSW 2022 A Pareto-Optimal Compositional Energy-Based Model for Sampling and Optimization of Protein Sequences Natasa Tagasovska, Nathan C. Frey, Andreas Loukas, Isidro Hotzel, Julien Lafrance-Vanasse, Ryan Lewis Kelly, Yan Wu, Arvind Rajpal, Richard Bonneau, Kyunghyun Cho, Stephen Ra, Vladimir Gligorijevic