Li, Mingyu

4 publications

ICML 2025 Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling Xiangxin Zhou, Mingyu Li, Yi Xiao, Jiahan Li, Dongyu Xue, Zaixiang Zheng, Jianzhu Ma, Quanquan Gu

ICML 2025 Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints Dapeng Jiang, Xiangzhe Kong, Jiaqi Han, Mingyu Li, Rui Jiao, Wenbing Huang, Stefano Ermon, Jianzhu Ma, Yang Liu

ICLRW 2024 F$^3$low: Frame-to-Frame Coarse-Grained Molecular Dynamics with SE(3) Guided Flow Matching Shaoning Li, Yusong Wang, Mingyu Li, Bin Shao, Nanning Zheng, Zhang Jian, Jian Tang

ICMLW 2024 Improving AlphaFlow for Efficient Protein Ensembles Generation Shaoning Li, Mingyu Li, Yusong Wang, Xinheng He, Zhang Jian, Nanning Zheng, Pheng-Ann Heng