Prakash, Mangal

18 publications

ICLR 2026 BioBO: Biology-Informed Bayesian Optimization for Perturbation Design Yanke Li, Tianyu Cui, Tommaso Mansi, Mangal Prakash, Rui Liao

ICLR 2026 GRAM-DTI: Adaptive Multimodal Representation Learning for Drug–Target Interaction Prediction Feng Jiang, Amina Mollaysa, Hehuan Ma, Yuzhi Guo, Tommaso Mansi, Junzhou Huang, Mangal Prakash, Rui Liao

ICLR 2025 Beyond Sequence: Impact of Geometric Context for RNA Property Prediction Junjie Xu, Artem Moskalev, Tommaso Mansi, Mangal Prakash, Rui Liao

NeurIPS 2025 DualEqui: A Dual-Space Hierarchical Equivariant Network for Large Biomolecules Junjie Xu, Jiahao Zhang, Mangal Prakash, Xiang Zhang, Suhang Wang

ICML 2025 Geometric Hyena Networks for Large-Scale Equivariant Learning Artem Moskalev, Mangal Prakash, Junjie Xu, Tianyu Cui, Rui Liao, Tommaso Mansi

ICLRW 2025 HARMONY: A Multi-Representation Framework for RNA Property Prediction Junjie Xu, Artem Moskalev, Tommaso Mansi, Mangal Prakash, Rui Liao

ICLR 2025 HELM: Hierarchical Encoding for mRNA Language Modeling Mehdi Yazdani-Jahromi, Mangal Prakash, Tommaso Mansi, Artem Moskalev, Rui Liao

ICML 2025 InfoSEM: A Deep Generative Model with Informative Priors for Gene Regulatory Network Inference Tianyu Cui, Song-Jun Xu, Artem Moskalev, Shuwei Li, Tommaso Mansi, Mangal Prakash, Rui Liao

ICLRW 2025 InfoSEM: A Deep Generative Model with Informative Priors for Gene Regulatory Network Inference Tianyu Cui, Song-Jun Xu, Artem Moskalev, Shuwei Li, Tommaso Mansi, Mangal Prakash, Rui Liao

NeurIPS 2025 TRIDENT: Tri-Modal Molecular Representation Learning with Taxonomic Annotations and Local Correspondence Feng Jiang, Mangal Prakash, Hehuan Ma, Jianyuan Deng, Yuzhi Guo, Amina Mollaysa, Tommaso Mansi, Rui Liao, Junzhou Huang

NeurIPSW 2024 Beyond Sequence: Impact of Geometric Context for RNA Property Prediction Junjie Xu, Artem Moskalev, Tommaso Mansi, Mangal Prakash, Rui Liao

NeurIPSW 2024 Bridging Biomolecular Modalities for Knowledge Transfer in Bio-Language Models Mangal Prakash, Artem Moskalev, Peter DiMaggio Jr., Steven Combs, Tommaso Mansi, Justin Scheer, Rui Liao

NeurIPSW 2024 HELM: Hierarchical Encoding for mRNA Language Modeling Mehdi Yazdani-Jahromi, Mangal Prakash, Tommaso Mansi, Artem Moskalev, Rui Liao

ICMLW 2024 SE(3)-Hyena Operator for Scalable Equivariant Learning Artem Moskalev, Mangal Prakash, Rui Liao, Tommaso Mansi

ICLR 2022 Interpretable Unsupervised Diversity Denoising and Artefact Removal Mangal Prakash, Mauricio Delbracio, Peyman Milanfar, Florian Jug

ICLR 2021 Fully Unsupervised Diversity Denoising with Convolutional Variational Autoencoders Mangal Prakash, Alexander Krull, Florian Jug

AISTATS 2020 A Primal-Dual Solver for Large-Scale Tracking-by-Assignment Stefan Haller, Mangal Prakash, Lisa Hutschenreiter, Tobias Pietzsch, Carsten Rother, Florian Jug, Paul Swoboda, Bogdan Savchynskyy

ECCVW 2020 DenoiSeg: Joint Denoising and Segmentation Tim-Oliver Buchholz, Mangal Prakash, Deborah Schmidt, Alexander Krull, Florian Jug