Shen, Ciyue

3 publications

ICMLW 2024 Interpretability Analysis on a Pathology Foundation Model Reveals Biologically Relevant Embeddings Across Modalities Nhat Le, Ciyue Shen, Chintan Shah, Blake Martin, Daniel Shenker, Harshith Padigela, Jennifer A. Hipp, Sean Grullon, John Abel, Harsha Vardhan Pokkalla, Dinkar Juyal

NeurIPSW 2024 Learning Biologically Relevant Features in a Pathology Foundation Model Using Sparse Autoencoders Nhat Minh Le, Neel Patel, Ciyue Shen, Blake Martin, Alfred Eng, Chintan Shah, Sean Grullon, Dinkar Juyal

NeurIPSW 2022 scPerturb: Information Resource for Harmonized Single-Cell Perturbation Data Tessa Durakis Green, Stefan Peidli, Ciyue Shen, Torsten Gross, Joseph Min, Samuele Garda, Jake P. Taylor-King, Debora Susan Marks, Augustin Luna, Nils Blüthgen, Chris Sander