Xu, Yaoyao

5 publications

TMLR 2025 Rethinking Spectral Augmentation for Contrast-Based Graph Self-Supervised Learning Xiangru Jian, Xinjian Zhao, Wei Pang, Chaolong Ying, Yimu Wang, Yaoyao Xu, Tianshu Yu

NeurIPS 2025 TEMPO: Temporal Multi-Scale Autoregressive Generation of Protein Conformational Ensembles Yaoyao Xu, Di Wang, Zihan Zhou, Tianshu Yu, Mingchen Chen

NeurIPS 2025 The Underappreciated Power of Vision Models for Graph Structural Understanding Xinjian Zhao, Wei Pang, Zhongkai Xue, Xiangru Jian, Lei Zhang, Yaoyao Xu, Xiaozhuang Song, Shu Wu, Tianshu Yu

ECML-PKDD 2024 Boosting Protein Language Models with Negative Sample Mining Yaoyao Xu, Xinjian Zhao, Xiaozhuang Song, Benyou Wang, Tianshu Yu

ICLRW 2024 Demystify the Secret Function in Protein Sequence via Conditional Diffusion Models Yaoyao Xu, Xuxi Chen, Tong Wang, Huan He, Tianlong Chen, Manolis Kellis