Sparse PCA via Bipartite Matchings

Abstract

We consider the following multi-component sparse PCA problem:given a set of data points, we seek to extract a small number of sparse components with \emph{disjoint} supports that jointly capture the maximum possible variance.Such components can be computed one by one, repeatedly solving the single-component problem and deflating the input data matrix, but this greedy procedure is suboptimal.We present a novel algorithm for sparse PCA that jointly optimizes multiple disjoint components. The extracted features capture variance that lies within a multiplicative factor arbitrarily close to $1$ from the optimal.Our algorithm is combinatorial and computes the desired components by solving multiple instances of the bipartite maximum weight matching problem.Its complexity grows as a low order polynomial in the ambient dimension of the input data, but exponentially in its rank.However, it can be effectively applied on a low-dimensional sketch of the input data.We evaluate our algorithm on real datasets and empirically demonstrate that in many cases it outperforms existing, deflation-based approaches.