Understanding Class Bias Amplification in Graph Representation Learning

Abstract

Recent research reveals that GNN-based graph representation learning may inadvertently introduce various structural biases. In this work, we discover a phenomenon of structural bias in graph representation learning called class bias amplification, which refers to the exacerbation of performance bias between different classes by GNN encoder. We conduct an in-depth theoretical study of this phenomenon from a novel spectral perspective. Our analysis suggests that structural disparities between nodes in different classes result in varying local convergence speeds for node embeddings. This phenomenon leads to bias amplification in the classification results of downstream tasks. Based on the theoretical insights, we propose random graph coarsening, which is proved to be effective in dealing with the above issue. Finally, we propose an unsupervised graph contrastive learning model called Random Graph Coarsening Contrastive Learning (RGCCL), which utilizes random coarsening as data augmentation and mitigates class bias amplification by contrasting the coarsened graph with the original graph. Extensive experiments on various datasets demonstrate the advantage of our method when dealing with class bias amplification.

Cite

Text

Zhang et al. "Understanding Class Bias Amplification in Graph Representation Learning." Transactions on Machine Learning Research, 2025.

Markdown

[Zhang et al. "Understanding Class Bias Amplification in Graph Representation Learning." Transactions on Machine Learning Research, 2025.](https://mlanthology.org/tmlr/2025/zhang2025tmlr-understanding/)

BibTeX

@article{zhang2025tmlr-understanding,
  title     = {{Understanding Class Bias Amplification in Graph Representation Learning}},
  author    = {Zhang, Shengzhong and Yang, Wenjie and Zhang, Yimin and Zhang, Hongwei and Huang, Zengfeng},
  journal   = {Transactions on Machine Learning Research},
  year      = {2025},
  url       = {https://mlanthology.org/tmlr/2025/zhang2025tmlr-understanding/}
}